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| Restart | Tutorial & Test Data | Documentation | Publication | News |
| Date: 3 November 2008 | We added Drosophila melanogaster (UCSC version dm3) to the database |
| Date: 3 November 2008 | Improved treatment of missing annotations: We added a new parameter which allows the user to specify exactly the way missing annotations are treated (see the help page). |
| Date: 3 November 2008 | Several default feature sets have been defined like a cross-section over all annotations, functional annotations only (GO-terms and Swiss-Prot keywords), protein features, overlap with genomic elements and features derived from TFBs. |